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The ancient humanoids seeded primorial worlds with DNA that would guide evolution toward the basic humanoid form, but most of the diversity among humanoid species we see would have come from adaptations to different environments (Cardassia is warm, so Cardassians evolved to prefer warm temperatures). The basic DNA template they left behind would of course randomly mutate beyond their control.

=Edit

This makes sense, but obviously the duration of time over which evolution occurs is the same everywhere

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